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..._D_spa_L/NOISeq/spa_D vs. spa_L_5519_NOISeq_rpkm_prob.tsv

...eq/spa_D vs. spa_L_5975_NOISeqbio_tmm_prob_seed_12345.tsv

...q/spa_D vs. spa_L_6749_NOISeqbio_rpkm_prob_seed_12345.tsv

...9/spa_D_spa_L/edgeR/plots/spa_D vs. spa_L edgeR - plotBCV

...D_spa_L/edgeR/plots/spa_D vs. spa_L edgeR - plotBCV - GLM

...9/spa_D_spa_L/edgeR/plots/spa_D vs. spa_L edgeR - plotMDS

...spa_D_spa_L/edgeR/plots/spa_D vs. spa_L edgeR - plotSmear

...0.9/spa_D_spa_L/edgeR/spa_D vs. spa_L_10894_edgeR_fdr.tsv

..._spa_L/spa_D_vs._spa_L_intersection_four_methods_5162.tsv

..._spa_L_intersection_four_methods_5162.tsv.filter_-1_1.tsv

...spa_L/spa_D_vs._spa_L_intersection_three_methods_5429.tsv

...spa_L_intersection_three_methods_5429.tsv.filter_-1_1.tsv

...lysis/DEGs/DEGs_0.9/spa_L_WT_D/DEGpipe_spa_L vs. WT_D.log

.../spa_L_WT_D/DESeq2/plots/spa_L vs. WT_D DESeq2 - DispEsts

...s_0.9/spa_L_WT_D/DESeq2/plots/spa_L vs. WT_D DESeq2 - PCA

.../spa_L_WT_D/DESeq2/plots/spa_L vs. WT_D DESeq2 - SdPlot.1

.../spa_L_WT_D/DESeq2/plots/spa_L vs. WT_D DESeq2 - SdPlot.2

.../spa_L_WT_D/DESeq2/plots/spa_L vs. WT_D DESeq2 - SdPlot.3

...0.9/spa_L_WT_D/DESeq2/spa_L vs. WT_D_11520_DESeq2_fdr.tsv

...WT_D/NOISeq/plots/spa_L vs. WT_D NOISeq - DE.nnorm_0.9_MD