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cmQTL_val1_arc

Description

Raw data of "PANTOTHENATE KINASE4, LOSS OF GDU2, and TRANSPOSON PROTEIN1 affect the canalization of tomato fruit metabolism" published in Plant Physiology (DOI: 10.1093/plphys/kiad093). The dataset consists primarily of metabolomics data from leaves and fruits of tomato plants grown across different watering regimes. The investigation aims to validate previously identified putative candidate genes relevant for the canalization of tomato fruit metabolites and therefore investigates different types of metabolic variation.

Figure 1 from Wijesingha et al. 2023

Experiment layout

Plants from MoneyMaker wild type plants and three CRISPR/Cas9-mediated genome edited mutant plants were grown under 40%, 60%, 80% and 100% of the standard optimal irrigation with six replicates per line and condition.

Experiment layout

Citation paper

Wijesingha Ahchige, M., Fernie, A. R., & Alseekh, S. (2023). PANTOTHENATE KINASE4, LOSS OF GDU2, and TRANSPOSON PROTEIN1 affect the canalization of tomato fruit metabolism. Plant Physiol, 192(1), 442-468. doi:10.1093/plphys/kiad093 (CC BY-NC-ND 4.0)

Project status

Adaptation of Rscripts to the ARC structure is still ongoing. Raw chromatograms will be uploaded soon.