Added a new arc-json.

See merge request !14

Ontology term entries in isa files corrected as acession number and source REFs were exchanged via arccommander for study and assays.

See merge request !13

Manually switched all Term Accession Number and Term Source REF from all isa entries from study and assays as these seem to remain being switched. Also corrected these in assay and study is files. This was a bug in the arccommander where the respective flags were changed and arguments passed via these were inserted in the opposing field, respectively for studies and assays. Also added manually the ontology source references of the ontologies from the study and assay part as these currently (v0.5.0 used fort this ARC) can not be passed via arccommander.

Manually reverted all ORCID changes in the isa.investiagtion file as these...

See merge request !12

Manually reverted all ORCID changes in the isa.investiagtion file as these were not the reason why the pipeline failed at the validation step.

Removed the lowest line for ORCID (comment)

See merge request !11

Removed the lowest line for ORCID (comment) as well as this was added by arccommander v0.5.0 for the study and a row already existed with the same name for the investigation.

ORCID manual fix

See merge request !10

ORCID manual fix: copied orcid for assay performer to investigation person orcid comment and removed worksheet comment in which the assay performer orcid was previously inserted by arc commander. Aim: get validation pipeline running and show quality badge.

ORCID manual fix: copied orcid for assay performer to investigation person orcid comment and removed worksheet comment in which the assay performer orcid was previously inserted by arc commander. Aim: get validation pipeline running and show quality badge.

arc.json added

See merge request !9

Andreaschrader main patch 32974

See merge request natural-variation-and-evolution/examples/microscopy_collection/map-by-seq_clsm-stacks!8

Updated README with more detailed author information

See merge request natural-variation-and-evolution/examples/microscopy_collection/map-by-seq_clsm-stacks!7

# Conflicts:
#   README.md

Corrected typo in README

See merge request natural-variation-and-evolution/examples/microscopy_collection/map-by-seq_clsm-stacks!6

Update README.md

See merge request natural-variation-and-evolution/examples/microscopy_collection/map-by-seq_clsm-stacks!5

Referred ti isa.investigation for now for the author information.

See merge request natural-variation-and-evolution/examples/microscopy_collection/map-by-seq_clsm-stacks!4

Abbreviated ARMADILLO REPEAT-CONTAINING KINESIN1.

See merge request natural-variation-and-evolution/examples/microscopy_collection/map-by-seq_clsm-stacks!3

Filled the README of the ARC.

Closes #2

See merge request natural-variation-and-evolution/examples/microscopy_collection/map-by-seq_clsm-stacks!2

Update .gitignore

See merge request natural-variation-and-evolution/examples/microscopy_collection/map-by-seq_clsm-stacks!1