assays/BSA_RNAseq/adapters/custom_adapters.fa

assays/BSA_RNAseq/adapters/readme.txt

assays/BSA_RNAseq/isa.assay.xlsx

assays/BSA_WGS/isa.assay.xlsx

assays/betalain_LCMS_quantification/isa.assay.xlsx

assays/betalain_photometric_quantification/isa.assay.xlsx

assays/isoform_sequencing/isa.assay.xlsx

isa.investigation.xlsx

studies/BSA_parent_betalain_quant/isa.study.xlsx

studies/Bulk_segregant_analysis/isa.study.xlsx

studies/additional_data/README.md

studies/additional_data/isa.study.xlsx

studies/additional_data/protocols/.gitkeep

studies/additional_data/resources/.gitkeep

studies/additional_data/resources/color_pathway_genes.bed

studies/additional_data/resources/color_pathway_genes.csv

studies/isoform_sequencing/isa.study.xlsx

workflows/BSA/RNAseq/QC.sh

workflows/BSA/RNAseq/adapter_trimming.sh

workflows/BSA/RNAseq/index_STAR.sh