.gitattributes

isa.investigation.xlsx

log.txt

runs/DBCreation/peptideDBParams.json

runs/DBCreation/proteomiqon-peptidedb.yml

runs/DBCreation/results/ChlamyDB.db

runs/DBCreation/results/PeptideDB_ChlamyDB_log.txt

runs/DBCreation/results/PeptideDB_log.txt

runs/DBCreation/run.cmd

runs/ProteomicsPipeline/ProteomIQon.yml

runs/ProteomicsPipeline/params/ProteinInferenceParams.json

runs/ProteomicsPipeline/params/QuantificationParams.json

runs/ProteomicsPipeline/params/pSMStatisticsParams.json

...teomicsPipeline/params/peptideSpectrumMatchingParams.json

runs/ProteomicsPipeline/params/preprocessingParams.json

.../ProteomicsPipeline/params/preprocessingParamsThermo.json

runs/ProteomicsPipeline/run.cmd

studies/CRheinhardtiiFastA/README.md

studies/CRheinhardtiiFastA/isa.study.xlsx

studies/CRheinhardtiiFastA/protocols/.gitkeep