Merge branch 'arc-cwl' into 'main'
Arc cwl See merge request !19
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- .cwl/README.md 1 addition, 1 deletion.cwl/README.md
- .cwl/arc-cwl.svg 245 additions, 0 deletions.cwl/arc-cwl.svg
- .cwl/cwl-plots/runs/kallisto.svg 5 additions, 5 deletions.cwl/cwl-plots/runs/kallisto.svg
- .cwl/cwl-plots/workflows/kallisto.svg 5 additions, 5 deletions.cwl/cwl-plots/workflows/kallisto.svg
- README.md 29 additions, 10 deletionsREADME.md
- arc-job.yml 76 additions, 0 deletionsarc-job.yml
- arc.cwl 80 additions, 0 deletionsarc.cwl
- runs/fastqc/run.cwl 3 additions, 3 deletionsruns/fastqc/run.cwl
- runs/isaSampleToRawDataSeq/rnaseq-samples.xlsx 0 additions, 0 deletionsruns/isaSampleToRawDataSeq/rnaseq-samples.xlsx
- runs/isaSampleToRawDataSeq/run.cwl 9 additions, 5 deletionsruns/isaSampleToRawDataSeq/run.cwl
- runs/kallisto/run.cwl 4 additions, 4 deletionsruns/kallisto/run.cwl
- runs/sleuth/run.cwl 2 additions, 2 deletionsruns/sleuth/run.cwl
- workflows/fastqc/fastqc.cwl 19 additions, 5 deletionsworkflows/fastqc/fastqc.cwl
- workflows/fastqc/gather-files.cwl 24 additions, 0 deletionsworkflows/fastqc/gather-files.cwl
- workflows/fastqc/workflow.cwl 7 additions, 5 deletionsworkflows/fastqc/workflow.cwl
- workflows/isaSampleToRawDataSeq/workflow.cwl 6 additions, 2 deletionsworkflows/isaSampleToRawDataSeq/workflow.cwl
- workflows/kallisto/gather-dirs.cwl 28 additions, 0 deletionsworkflows/kallisto/gather-dirs.cwl
- workflows/kallisto/kallisto-index.cwl 36 additions, 5 deletionsworkflows/kallisto/kallisto-index.cwl
- workflows/kallisto/kallisto-quant.cwl 44 additions, 2 deletionsworkflows/kallisto/kallisto-quant.cwl
- workflows/kallisto/kallisto-test.cwl 0 additions, 18 deletionsworkflows/kallisto/kallisto-test.cwl
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