change kallisto container to v 0.51

workflows/kallisto/kallisto-help.cwl

@@ -4,15 +4,15 @@ class: CommandLineTool
 
 hints:
   DockerRequirement:
-    dockerPull: quay.io/biocontainers/kallisto:0.46.2--h4f7b962_1
+    dockerPull: quay.io/biocontainers/kallisto:0.51.0--h6de1650_0
   SoftwareRequirement:
     packages:
       kallisto:
-        version: [ "0.46.0" ]
+        version: [ "0.51.0" ]
         specs: [ https://identifiers.org/biotools/kallisto ]
 
 inputs: []
 
-baseCommand: [kallisto, index]
+baseCommand: [kallisto]
 
 outputs: []
\ No newline at end of file

workflows/kallisto/kallisto-index.cwl

 #!/usr/bin/env cwl-runner
-cwlVersion: v1.0
+cwlVersion: v1.2
 class: CommandLineTool
 
 hints:
   DockerRequirement:
-    dockerPull: quay.io/biocontainers/kallisto:0.46.2--h4f7b962_1
+    dockerPull: quay.io/biocontainers/kallisto:0.51.0--h6de1650_0
   SoftwareRequirement:
     packages:
       kallisto:
-        version: [ "0.46.0" ]
+        version: [ "0.51.0" ]
         specs: [ https://identifiers.org/biotools/kallisto ]
 
 requirements:        

workflows/kallisto/kallisto-quant.cwl

 #!/usr/bin/env cwl-runner
-cwlVersion: v1.0
+cwlVersion: v1.2
 class: CommandLineTool
 
 hints:
   DockerRequirement:
-    dockerPull: quay.io/biocontainers/kallisto:0.46.2--h4f7b962_1
+    dockerPull: quay.io/biocontainers/kallisto:0.51.0--h6de1650_0
   SoftwareRequirement:
     packages:
       kallisto:
-        version: [ "0.46.0" ]
+        version: [ "0.51.0" ]
         specs: [ https://identifiers.org/biotools/kallisto ]
 
 inputs: