add bmfz data, no git-lfs yet

.gitignore

@@ -382,3 +382,5 @@ Network Trash Folder
 Temporary Items
 .apdisk
 
+
+*.raw
\ No newline at end of file

README.md

@@ -12,11 +12,35 @@ arc i create -i "Ricinus proteome"
 mkdir _NicolesData; touch _NicolesData/.gitkeep
 ```
 
-## add raw dataset as retrieve from Anja Stefanski via Sciebo (06.04.2022)
+## add raw dataset as retrieved from Anja Stefanski via Sciebo (06.04.2022)
+
+### setup assay structure
 
 ```bash
 arc assay add -s "2012_ricinus_proteome_wrobel" -a "2012_proteome_data_bmfz_stefanski"
+```
+
+### run md5s on downloaded data
+
+```bash
+md5 ~/Downloads/Daten\ Linka/*.raw > _NicolesData/raw_data_md5s.txt
+```
 
-cp ~/Download
+### Add large data to gitignore for now...
 
+```bash
+printf "\n*.raw" >> .gitignore
+```
+
+### add downloaded data to arc
+
+```bash
+mv ~/Downloads/Daten\ Linka/Messliste_Wrobel.xlsx _NicolesData/
+mv ~/Downloads/Daten\ Linka/*.raw assays/2012_proteome_data_bmfz_stefanski/dataset
+```
+
+### sync arc with GitLab
+
+```bash
+arc sync -m "add raw data from bmfz"
 ```
\ No newline at end of file

_NicolesData/raw_data_md5s.txt

+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02336.raw) = df329fb56d693c51d3f4f9e9d47bf3f6
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02337.raw) = 20f1c046899975cb9bba5fec47aed31d
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02339.raw) = 8ec359bfc6bd2f2edfd28ea21f28bd2a
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02340.raw) = a36bf4b606dc008b873cb6fa22582027
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02342.raw) = f09d2eb6867a304f4dec8e5465ea96f2
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02343.raw) = 14da4e792980dea5cf8e75f39d8c58ad
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02345.raw) = df4a4da1c7d9917d50062c73f13054d3
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02346.raw) = 9d1e5fbbe9db3422d74c9403ce9472da
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02396.raw) = 9cece1c71528c47f3fa13b05bedb95fb
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02397.raw) = 5dcd5bd48c3ffc0facc61171e1a43919
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02399.raw) = b6b2d9c4cf72affefaede1c17e3dbd2c
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02400.raw) = 7369ddf770d2e17d12f098fd7df656ef
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02402.raw) = 08d7429cebe720c73d8f6a3dd3570933
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02403.raw) = ffb4fd4313959d6ce387d2cc099fc00f
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02405.raw) = aad6229645856756a1226c691b98fc83
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02406.raw) = 32895aa1155cda14463f52bf9c575740
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02408.raw) = 39f9bde1f8fd35de6f0886a479f85286
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02409.raw) = 124d15829581e8b193f1949e3f14fc63
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02412.raw) = fa0bb5abb901d306bad4d985251537af
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02413.raw) = eef196922615cd0311c65b088b6cf65e
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02415.raw) = fc61cf631605902e7b5fb014520bf8c9
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02416.raw) = c42adb8280c8d2fcfef6b593da758cf8
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02418.raw) = 53abf117bfee8c93bfe44621c7e94254
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02419.raw) = 82e68d8c0952bef1404ce4f489cfcac4
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02421.raw) = 23404ff8e4d443a344b00b0639d567f4
+MD5 (/Users/dominikbrilhaus/Downloads/Daten Linka/OE02422.raw) = 1b971dd0963daa184e34d0725c3f59c0