README.md

assays/Proteomics_DataAnalysis/README.md

assays/Proteomics_DataAnalysis/dataset/.gitkeep

...DataAnalysis/dataset/MSFraggerOutput/combined_protein.csv

...ys/Proteomics_DataAnalysis/dataset/combined_protein.fasta

assays/Proteomics_DataAnalysis/isa.assay.xlsx

assays/Proteomics_DataAnalysis/protocols/.gitkeep

...ysis/protocols/AssayTemplate_Proteomics_DataAnalysis.json

assays/Proteomics_MS/README.md

assays/Proteomics_MS/dataset/.gitkeep

...oteomics_MS/dataset/MS_Raw/WT_Cold_1_Measured.d/dummy.txt

...oteomics_MS/dataset/MS_Raw/WT_Cold_2_Measured.d/dummy.txt

...oteomics_MS/dataset/MS_Raw/WT_Cold_3_Measured.d/dummy.txt

...Proteomics_MS/dataset/MS_Raw/WT_RT_1_Measured.d/dummy.txt

...Proteomics_MS/dataset/MS_Raw/WT_RT_2_Measured.d/dummy.txt

...Proteomics_MS/dataset/MS_Raw/WT_RT_3_Measured.d/dummy.txt

assays/Proteomics_MS/isa.assay.xlsx

assays/Proteomics_MS/protocols/.gitkeep

.../Proteomics_MS/protocols/AssayTemplate_Proteomics_MS.json

assays/SugarMeasurement/README.md