add: genetic diversity directory
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- workflows/genetic_diversity/hierfstats/plots/fst.txt 5 additions, 0 deletionsworkflows/genetic_diversity/hierfstats/plots/fst.txt
- workflows/genetic_diversity/hierfstats/plots/genetic_diversity_report.txt 10 additions, 0 deletions...c_diversity/hierfstats/plots/genetic_diversity_report.txt
- workflows/genetic_diversity/hierfstats/plots/genotype_pca_plot.png 0 additions, 0 deletions.../genetic_diversity/hierfstats/plots/genotype_pca_plot.png
- workflows/genetic_diversity/hierfstats/plots/genotype_pca_plot_cols_ecogeo_paper.png 0 additions, 0 deletions.../hierfstats/plots/genotype_pca_plot_cols_ecogeo_paper.png
- workflows/genetic_diversity/hierfstats/plots/nei87_all_accessions.txt 7 additions, 0 deletions...netic_diversity/hierfstats/plots/nei87_all_accessions.txt
- workflows/genetic_diversity/hierfstats/plots/nei87_all_accessions_10.04.2022.txt 7 additions, 0 deletions...sity/hierfstats/plots/nei87_all_accessions_10.04.2022.txt
- workflows/genetic_diversity/hierfstats/plots/scree_gbs_pca_plot.png 0 additions, 0 deletions...genetic_diversity/hierfstats/plots/scree_gbs_pca_plot.png
- workflows/genetic_diversity/hierfstats/plots/wc84_all_accessions.txt 7 additions, 0 deletions...enetic_diversity/hierfstats/plots/wc84_all_accessions.txt
- workflows/genetic_diversity/hierfstats/plots/wc84_all_accessions_10.04.2022.txt 7 additions, 0 deletions...rsity/hierfstats/plots/wc84_all_accessions_10.04.2022.txt
- workflows/genetic_diversity/hierfstats/scripts/figtree_annotation_2.txt 3604 additions, 0 deletions...tic_diversity/hierfstats/scripts/figtree_annotation_2.txt
- workflows/genetic_diversity/hierfstats/scripts/genotype_pca.R 137 additions, 0 deletions...flows/genetic_diversity/hierfstats/scripts/genotype_pca.R
- workflows/genetic_diversity/hierfstats/scripts/hierfst_data_prep_bash_commands.sh 24 additions, 0 deletions...ity/hierfstats/scripts/hierfst_data_prep_bash_commands.sh
- workflows/genetic_diversity/hierfstats/scripts/hierfstats_hetero.Rmd 171 additions, 0 deletions...enetic_diversity/hierfstats/scripts/hierfstats_hetero.Rmd
- workflows/genetic_diversity/hierfstats/scripts/lables.txt 3606 additions, 0 deletionsworkflows/genetic_diversity/hierfstats/scripts/lables.txt
- workflows/genetic_diversity/hierfstats/scripts/parv_annotation_with_location.txt 1793 additions, 0 deletions...sity/hierfstats/scripts/parv_annotation_with_location.txt
- workflows/genetic_diversity/vcftools_analysis/het_analysis.sh 3 additions, 0 deletions...flows/genetic_diversity/vcftools_analysis/het_analysis.sh
- workflows/genetic_diversity/vcftools_analysis/results/.ipynb_checkpoints/T3604_33929-checkpoint.het 3605 additions, 0 deletions...sis/results/.ipynb_checkpoints/T3604_33929-checkpoint.het
- workflows/genetic_diversity/vcftools_analysis/results/.ipynb_checkpoints/T3604_33929-checkpoint.tsv 3605 additions, 0 deletions...sis/results/.ipynb_checkpoints/T3604_33929-checkpoint.tsv
- workflows/genetic_diversity/vcftools_analysis/results/T3604_33929.het 3605 additions, 0 deletions...netic_diversity/vcftools_analysis/results/T3604_33929.het
- workflows/genetic_diversity/vcftools_analysis/results/T3604_33929.log 14 additions, 0 deletions...netic_diversity/vcftools_analysis/results/T3604_33929.log
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