Notes.txt~

#create directory

mkdir 2023_Krueger_prophage_lysis-lysogeny_MrpR


#go to created directory
cd 2023_Krueger_prophage_lysis-lysogeny_MrpR/

#Initialize your ARC by executing
arc init

##Adding metadata

#ISA investigation
arc investigation create -i 2023_Krueger_prophage_lysis-lysogeny_MrpR

#ISA studies
#arc study add -s 2023_Krueger_prophage_lysis-lysogeny_MrpR

#ISA studies & assays 
arc assay add -s 2022_Krüger_pseudokinase_heme_tolerance -a ChAPSeq-Illumina

#ISA studies & assays 
arc assay add -s 2022_Krüger_pseudokinase_heme_tolerance -a BioLector

####Sharing your ARC
#Allow git to store credentials on your machine.
git config --global credential.helper store

#created token manually
Create and set an access token



arc sync -f -r https://git.nfdi4plants.org/v.sharma/2023_Krueger_prophage_lysis-lysogeny_MrpR -m "initialize ARC structure"