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Commit 81d8c8ef authored by VIKAS SHARMA's avatar VIKAS SHARMA
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Delete Notes.txt~

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Stage: arc_json
    Stage: quality_report_generator
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      #create directory
      mkdir 2023_Krueger_prophage_lysis-lysogeny_MrpR
      #go to created directory
      cd 2023_Krueger_prophage_lysis-lysogeny_MrpR/
      #Initialize your ARC by executing
      arc init
      ##Adding metadata
      #ISA investigation
      arc investigation create -i 2023_Krueger_prophage_lysis-lysogeny_MrpR
      #ISA studies
      #arc study add -s 2023_Krueger_prophage_lysis-lysogeny_MrpR
      #ISA studies & assays
      arc assay add -s 2022_Krüger_pseudokinase_heme_tolerance -a ChAPSeq-Illumina
      #ISA studies & assays
      arc assay add -s 2022_Krüger_pseudokinase_heme_tolerance -a BioLector
      ####Sharing your ARC
      #Allow git to store credentials on your machine.
      git config --global credential.helper store
      #created token manually
      Create and set an access token
      arc sync -f -r https://git.nfdi4plants.org/v.sharma/2023_Krueger_prophage_lysis-lysogeny_MrpR -m "initialize ARC structure"
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