Missing Transcriptomics raw data
3 of 90 transcriptomics samples are missing on SRA.
The remaining 87 were downloaded, zipped and uploaded to the respective ARC assay using:
- command line tool: sratools
- dir: sratoolkit.3.0.0-win64/bin
- command: .\prefetch SRR1548xxxx ; .\fasterq-dump -O .\SRR1548xxxx SRR1548xxxx -p
The missing files were reported to Erin and the SRA office:
- recovery_24h_35C_C (SRX11781333)
- heat_0.5h_40C_A (SRX11781343)
- heat_16h_40C_C (SRX11781360)
Edited by Benedikt Venn