Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
VonDahlen-2023
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Package Registry
Container Registry
Model registry
Operate
Environments
Terraform modules
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
CEPLAS
VonDahlen-2023
Commits
c561ed4c
Commit
c561ed4c
authored
6 months ago
by
Viktoria Petrova
Browse files
Options
Downloads
Patches
Plain Diff
add README to study
parent
52d07696
No related branches found
No related tags found
1 merge request
!1
Ceplas dm viktoria
Pipeline
#3992
passed
6 months ago
Stage: arc_json
Stage: quality_report_generator
Changes
1
Pipelines
1
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
studies/TranscriptomeDataSets/README.md
+15
-0
15 additions, 0 deletions
studies/TranscriptomeDataSets/README.md
with
15 additions
and
0 deletions
studies/TranscriptomeDataSets/README.md
+
15
−
0
View file @
c561ed4c
# Transcriptome Data Sets

**Figure S1: Composition of data set**
This study is based on 315 transcriptomes (133 from tomato (a), 182 from potato (b)) and includes
seven plant pathogen domains (bacteria, fungi, oomycetes, nematodes, viroids, viruses, insects). The
pathogens include common pests of tomato and potato as well as mycorrhizal forming organisms and
potential biocontrol agents (green cross/grey text). The pathogens belong to biotrophic (green circle),
necrotrophic (brown circle), hemibiotrophic (green-brown circle) as well as unknown (grey circle) or
none categorical (pink circle) pathogens. We included transcriptomes from root, fruit, stem and leaves
of resistant (shield) as well as susceptible cultivars (crossed-out shield) that were generated at 12
different time points (0 dpi until the end of the life cycle of the plant). Cultivars ranged from 13 (a) to
15 (b) per host.
\ No newline at end of file
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment