README.md

Ribes nigrum genome sequencing experiment

To generate a blackcurrant genome assembly, DNA of the cultivar R. nigrum Rosenthals Langtraubige was used. DNA was extracted from young leaves of a single adult plant. Sequencing was performed with Oxford Nanopore Technologies, PacBio HiFi and Illumina.

Study metadata

This is an overview about the metadata for the R. nigrum genome sequencing experiment. The metadata can also be found in the isa.study file.

Input [Source Name]	Characteristic [organism]	Characteristic [plant structure development stage]	Characteristic [plant structure]	Characteristic [geographic area]	Output [Sample Name]
R. nigrum cv Rosenthals Langtraubige	Ribes nigrum	adult	leaves	Germany	R. nigrum cv Rosenthals Langtraubige_Leaves

Experimental set-up

Related repositories and files

After harvesting of leaves, the following steps were performed:

DNA isolation Library preparation Sequencing Genome assembly Genome analysis