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PPD-H1 Improves Stress Resistance and Energy Metabolism to Boost Spike Fertility under High Ambient Temperatures

This ARC is based on the research of Mönchgesang et al. 2016, who performed a metabolite profiling of 19 Arabidopsis thaliana accessions. The natural variability of root metabolic patterns was analyzed between different accessions, with the result that plant-to-plant variability is greater than natural variation between accessions and non-biological variation between experimental batches.

RNA seq from Solanum lycopersicoides plants, performed for the manuscript entitled "A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity."

A systematic overexpression approach reveals native targets to increase squalene production in Synechocystis sp. PCC 6803

Sugar transporters spatially organize microbiota colonization along the longitudinal root axis of Arabidopsis

Reversible Burst of Transcriptional Changes during Induction of Crassulacean Acid Metabolism in Talinum triangulare.

Oxa was applied to human cells and checked for antifibrotic effects

In the present study we aimed at the highest possible resolution of this network by combining analysis of transcriptome, proteome and subcellularly resolved metabolome of plants that were exposed to rising carbon dioxide concentrations over a time course of one week.

Fungal pathogens depend on sophisticated gene expression programs for successful infection. A crucial component is RNA regulation mediated by RNA-binding proteins (RBPs). However, little is known about the spatiotemporal RNA control mechanisms during fungal pathogenicity. Here, we discover that the RBP Khd4 defines a distinct mRNA regulon to orchestrate membrane trafficking during pathogenic development of Ustilago maydis. By establishing hyperTRIBE for fungal RBPs, we generated a comprehensive transcriptome-wide map of Khd4 interactions in vivo. We identify a defined set of target mRNAs enriched for regulatory proteins involved, e.g., in GTPase signaling. Khd4 controls the stability of target mRNAs via its cognate regulatory element AUACCC present in their 3′ untranslated regions. Studying individual examples reveals a unique link between Khd4 and vacuole maturation. Thus, we uncover a distinct role for an RNA stability factor defining a specific mRNA regulon for membrane trafficking during pathogenicity.

Differential analysis of lpa2 mutant Chlamy complexome